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1. nanoporetech/medaka nanoporetech/medaka Public

   Neural-network consensus polishing and variant calling for Oxford Nanopore sequencing data

   Python 522 90

2. epi2me-labs/fastcat epi2me-labs/fastcat Public

   Ultra fast FASTQ and BAM processing, filtering, concatenation and sequencing QC/statistics.

   C 57 4

3. epi2me-labs/wf-single-cell epi2me-labs/wf-single-cell Public

   End-to-end analysis of Oxford Nanopore single-cell sequencing, from barcode and UMI identification to gene and transcript expression

   Python 119 53

4. yangao07/longcallD yangao07/longcallD Public

   LongcallD: joint calling and phasing of small, structural and mosaic variants from long reads

   C 109 7

5. epi2me-labs/modbam2bed epi2me-labs/modbam2bed Public

   Aggregate modified-base calls from BAM files into bedMethyl for downstream methylation analysis

   C 53 10

6. ha-glowmarkt ha-glowmarkt Public

   Home Assistant integration for importing UK Glowmarkt/Bright smart-meter usage, export, cost and tariff data

   Python 1