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Jupyter Notebook 1.3k 277
RNA Velocity generalized through dynamical modeling
Python 505 114
Reference mapping for single-cell genomics
Jupyter Notebook 406 71
Benchmarking analysis of data integration tools
Python 426 76
Electronic Health Record Analysis with Python.
Python 362 53
Multi-omic single-cell optimal transport tools
Python 216 17
A dashboard of everything in the theislab GitHub repository
Reference implementations and fixture generators for squidpy ports
Scalable framework for integrating single-cell omics with genetic data using AnnData.
inferring regulatory cellular dynamics
InterScale's reproducibility repository.
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